C8CR7ACXX_l04n01_sea206.35100000057968.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C8CR7ACXX_l04n01_sea206.35100000057968.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2790836
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCTCGTATGCC	77891	2.7909558282894444	TruSeq Adapter, Index 6 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACACGTC	8455	43.08492	13
CACACGT	8490	42.933804	12
CTCGTAT	8380	42.9059	42
CACGTCT	8525	42.730373	14
TCGTATG	8465	42.57986	43
AGTCACG	8455	42.57853	28
CGTATGC	8505	42.461246	44
ACGTCTG	8585	42.377796	15
GCACACG	8630	42.368427	11
GTATGCC	8540	42.313576	45
TCTCGTA	8520	42.22728	41
CAGTCAC	8595	42.093655	27
TATCTCG	8550	42.079117	39
GTCACGC	8510	41.93319	29
GAACTCC	8695	41.893433	21
CGTCTGA	8710	41.84712	16
AGCACAC	8745	41.811268	10
ATCTCGT	8670	41.548607	40
CCAGTCA	8705	41.535896	26
GATCGGA	8775	41.4472	1