FastQCFastQC Report
Mon 6 Jun 2016
C8CR7ACXX_l02n01_wt1.351000000577d4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC8CR7ACXX_l02n01_wt1.351000000577d4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14
Sequences flagged as poor quality0
Sequence length51
%GC69

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCTGTCCCCCCTCCTCCCTCTCTTCCCAGCCGTCTCGCCCGCCGCCGGTG17.142857142857142No Hit
CCCCCCCCTCTGCCTCCCTTGCTCTCTGTCGGTCGCCTTCCCCCAGTCTCC17.142857142857142No Hit
TCCTGCCCCCGGTCTTGTTGCTCCCGTATTCGTCCCCGCCCNCCCCGCTGG17.142857142857142No Hit
GGCCGCTCTGCCGCTCCCCTCGCGCCTCTCGCCCCCGTTTGCCGCGGCCCC17.142857142857142No Hit
CTCTCCTCTGTGCCCTTTCTCTCGACCGCCCCCGCTTGTGCACCTGTTCCT17.142857142857142No Hit
GGCCTGCTTCCTGCCCTTCTGGCGCCCTCCGGGGCTGGCCCGTCTTCTCTG17.142857142857142No Hit
TCTGCTTCCCTGCGGCCTTCTCTGCGTCTCTTTCTGTCGGCTGCCCGGTCG17.142857142857142No Hit
CCGGCTTGTCGCTCGTCCCGTCTCGCTTGTGTCCCTTTTTTGCCTTCCTCC17.142857142857142No Hit
CCCCCCTTTCCTGTTCTGCGTCGCCCTCCCTGTCGTCCCTGCCCCCTCCCC17.142857142857142No Hit
CTCCCTCTGCCTGTCCCCTCCCGCCCCTCTTGCCTGTCCTGNTTCGCCCTC17.142857142857142No Hit
CGCTGGCCCCTGGTCCTTTTCCCCCTCGGTCTCGGCCGTCTNCGTCCCTTT17.142857142857142No Hit
TCTGCTTCCCTGCGTCCTTCTCTGCGTCTCTTTCTGTCGGCTGCCCGGTCG17.142857142857142No Hit
CTGTCCCCTTGCCCCTCTCTCTGCCTGCCCCTTCCCCCCCCCCTTTCCAGT17.142857142857142No Hit
TCGCTCCCGTGCCCGCTGCTCCCTGCCTCTTCTTTCCCGCTCCGTCCCCTG17.142857142857142No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)