FastQCFastQC Report
Mon 6 Jun 2016
C8CR7ACXX_l02n01_r1.35100000057a24.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC8CR7ACXX_l02n01_r1.35100000057a24.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1219
Sequences flagged as poor quality0
Sequence length51
%GC67

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCTCTCTTCCTCCCCTGTCCCCTTGCCCCTCCCTCTGCCTGCCCCCTCC40.3281378178835111No Hit
GCCTCGTGCGTGTTTCTGCTTCCCTGCGTCCTTCTCTGCGTCTCTTTCTGT30.2461033634126333No Hit
CTCCCTTTGTCTTTTGCCCCCTCTCTTCCTCCCCTGTCCCCTTGCCCCTCC30.2461033634126333No Hit
TTGTCTTTTGCCCCCTCTCTTCCTCCCCTGTCCCCTTGCCCCTCCCTCTGC30.2461033634126333No Hit
TTCCTCTGCCTGCCCCCCTCCCTTTGTCTTTTGCCCCCTCTCTTCCTCCCC30.2461033634126333No Hit
CTTCCTCCCCTGTCCCCTTGCCCCTCCCTCTGCCTGCCCCCTCCCGCCCCC30.2461033634126333No Hit
TCCGGTGCCGTCCCTGCCCCCCCCCTCCCCTCTCTGTCTTCCCCCCCCTCC20.16406890894175555No Hit
CCCCCCTCCTCCCTCTCTTCCCGTCCTTCTCGCCCGCCTCCGGTGCCGTCC20.16406890894175555No Hit
CCTGCCCCCCCCCTCCCCTCTCTGTCTTCCCCCCCCTCCTTTTCCTCTGCC20.16406890894175555No Hit
CCCCTCCCTTTGTCTTTTGCCCCCTCTCTTCCTCCCCTGTCCCCTTGCCCC20.16406890894175555No Hit
TGCGCCGCCCGGCCTCGTGCGTGTTTCTGCTTCCCTGCGTCCTTCTCTGCG20.16406890894175555No Hit
GCCTCCGGTGCCGTCCCTGCCCCCCCCCTCCCCTCTCTGTCTTCCCCCCCC20.16406890894175555No Hit
TTTTGCCCCCTCTCTTCCTCCCCTGTCCCCTTGCCCCTCCCTCTGCCTGCC20.16406890894175555No Hit
CCCCCCCCTCCTTTTCCTCTGCCTGCCCCCCTCCCTTTGTCTTTTGCCCCC20.16406890894175555No Hit
CCCCCTCCCTTTGTCTTTTGCCCCCTCTCTTCCTCCCCTGTCCCCTTGCCC20.16406890894175555No Hit
GCCCCCCCCCTCCCCTCTCTGTCTTCCCCCCCCTCCTTTTCCTCTGCCTGC20.16406890894175555No Hit
CCCTCCTTTTCCTCTGCCTGCCCCCCTCCCTTTGTCTTTTGCCCCCTCTCT20.16406890894175555No Hit
CCTCCTTTTCCTCTGCCTGCCCCCCTCCCTTTGTCTTTTGCCCCCTCTCTT20.16406890894175555No Hit
CCTTGCCCCTCCCTCTGCCTGCCCCCTCCCGCCCCCCTTTCCTGTTCTGTT20.16406890894175555No Hit
TCTCTGTCTTCCCCCCCCTCCTTTTCCTCTGCCTGCCCCCCTCCCTTTGTC20.16406890894175555No Hit
CTGTCCCCTTGCCCCTCCCTCTGCCTGCCCCCTCCCGCCCCCCTTTCCTGT20.16406890894175555No Hit
CGGTGCCGTCCCTGCCCCCCCCCTCCCCTCTCTGTCTTCCCCCCCCTCCTT20.16406890894175555No Hit
CCCCCCCCTCCCCTCTCTGTCTTCCCCCCCCTCCTTTTCCTCTGCCTGCCC20.16406890894175555No Hit
GTCCCTGCCCCCCCCCTCCCCTCTCTGTCTTCCCCCCCCTCCTTTTCCTCT20.16406890894175555No Hit
TGCCCCTCCCTCTGCCTGCCCCCTCCCGCCCCCCTTTCCTGTTCTGTTTCG20.16406890894175555No Hit
CCTCCCTCTCTTCCCGTCCTTCTCGCCCGCCTCCGGTGCCGTCCCTGCCCC20.16406890894175555No Hit
CCGTCCCTGCCCCCCCCCTCCCCTCTCTGTCTTCCCCCCCCTCCTTTTCCT20.16406890894175555No Hit
TGCCTGTCTCTCTCTCTCCCTGCGCCGCCCGGCCTCGTGCGTGTTTCTGCT20.16406890894175555No Hit
CTCCCTCTCTTCCCGTCCTTCTCGCCCGCCTCCGGTGCCGTCCCTGCCCCC20.16406890894175555No Hit
GTGCCGTCCCTGCCCCCCCCCTCCCCTCTCTGTCTTCCCCCCCCTCCTTTT20.16406890894175555No Hit
CGGCTGCCCGGTCGTCTCGTCCCTCCTGTGCTCTTCTCCCCTTCCCTGCGG20.16406890894175555No Hit
CCTCGTGCGTGTTTCTGCTTCCCTGCGTCCTTCTCTGCGTCTCTTTCTGTC20.16406890894175555No Hit
TGCCCCCCCCCTCCCCTCTCTGTCTTCCCCCCCCTCCTTTTCCTCTGCCTG20.16406890894175555No Hit
CCTCCCCTGTCCCCTTGCCCCTCCCTCTGCCTGCCCCCTCCCGCCCCCCTT20.16406890894175555No Hit
CTCTGCGTCTCTTTCTGTCGGCTGCCCGGTCGTCTCGTCCCTCCTGTGCTC20.16406890894175555No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)