FastQCFastQC Report
Mon 6 Jun 2016
C8CR7ACXX_l02n01_mms1.35100000057819.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC8CR7ACXX_l02n01_mms1.35100000057819.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences109
Sequences flagged as poor quality0
Sequence length51
%GC68

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTGCCTCCTCCTTTGTCCTGTTTGCCCCCCTTGCCTCTTGTCCGCCGC10.9174311926605505No Hit
TCGTCCTTCCGTTCGCCTGGTCTCCTTGCCCTCTCTTCGTTTGCTGTCTTT10.9174311926605505No Hit
CCTGTCTTGTTTTTGCGCCTCGCCTCTGTTTCTTTCCGCCTTGGGTGTTGC10.9174311926605505No Hit
TTCCTTCCCGCTTTCCCGTTCTCCCCTGTCTCTCCTCCCCCTGTCTCCCTT10.9174311926605505No Hit
TGTTGTCTCGTCGCCCGTGCCGCTGCTTCTTTCCCCTCTCCCTCACTGCCC10.9174311926605505No Hit
CCGTCCCTTCTCTCGCCTTTTCCGGCGCCCCTCCTCTTCCTTGTGGCCCTC10.9174311926605505No Hit
CCGCCGCGCGTCTCGTCTCCTCCTTTTCGCCTCTTGCGTCTTCGCTCTTTC10.9174311926605505No Hit
CTGGCCTCCTCGCCCCTCCCCCCGTGTTCCTGTCCCTTTTCCCCCTTCCCC10.9174311926605505No Hit
CCCGCTGCCCTCCGGTGCCTTCGTTTCTTCGCTCTCGGCGGTTCTCCCCTC10.9174311926605505No Hit
CGCGCCTGCCCGCGTCGTGTCGTGCGTGCCCCTCCGCGCCCCTCCCGTGCC10.9174311926605505No Hit
GGCTCTGCTGTGCGCGCTGGCGCCCTCCCTTTTCCCGCTTCACCGCGTCCT10.9174311926605505No Hit
CCCTCCTCGTCCTCTCCGTCTGTCGCCCTGTCACTTCCTTTTTGCGGCCTC10.9174311926605505No Hit
GCTCTCTTCTCTCTCTTCCCTCCTTCCCCCCGCCCGTCGCTCCTCCCCCTT10.9174311926605505No Hit
GTCCCCGCGTCCTGCCCGTGGGTCGTGGTTCTGCTCTCCTGNCCCCCCCCC10.9174311926605505No Hit
CTCCCCCCTTCCCTCTTCTCTCCCCTTCTCCTCTTCCCCTTCTTCCTCGCG10.9174311926605505No Hit
TCTCGCCCCGGCTGCCCTCGCCCTCGCTGCCGCTGCCTCCCCCGCGCCGGC10.9174311926605505No Hit
TTCCGGCGTCCCCCCCGCCGCCCCGACCGCCTGTTTTCCCCCTCCCTTTTT10.9174311926605505No Hit
CCTCGCTGTGGTCGCCCTGGTCGCGCCCCTCGCGTGGGACCCGCCCTTCCG10.9174311926605505No Hit
CGTTTTGCCCCTCTCTCCGTTCTCCCCGGCGCCTCTCTTCCCCCTGCCGGC10.9174311926605505No Hit
CGCGGTGCGTTCTCCGGTCCGCTCTTTCTCCCCGGTCGCCCGGTCGCTTTC10.9174311926605505No Hit
CTCCGCCCCCCCCCCCCGCTTCCCGGCCCGCCCTTCCCCTGTTGCCCCCCC10.9174311926605505No Hit
CTCTCCTCTCCCCCCTCCCCGCGCTCGTTCGTCCCTTCCCCCCTTCTGCCC10.9174311926605505No Hit
GCGCCCCTCTTTGCCTCTCCCTTCGCCCCGTGTTCGCCTCCCCCCCCTCCC10.9174311926605505No Hit
GCTCTGCTGTTCCCTTTTTTTCTCTTCCTGCCTCTTCGTGCGTCGTTCTCG10.9174311926605505No Hit
TGCTTGGTCTGCATCCTTGCGCTCCCGCCCGCGCCCTTCCCCTCCTCCCTC10.9174311926605505No Hit
CTTCCCTTTCTCCCGCCTCTCTCTCCCTTGCTCCCCGCTTCCCTCGGTCTT10.9174311926605505No Hit
CTCTTCTCCCCCCCCCGTTTTCGTCTCTGTGCTCGCCCGGCTCCCCCCCTC10.9174311926605505No Hit
TCCTGGTCTTGCCGCCGTGCCCGCCCCTCGCTCCGTCCGCCCCTGCGCCTC10.9174311926605505No Hit
TCTGTTTCGCCCTCCCTCTTGTCCCTGCCCCCTCCCCTTTTTCCTCGTCTG10.9174311926605505No Hit
GCCTGCGCTCTTGTTCTTGCTCTGCCTGCCCTTCTTGTTCCGTCTGTTGCT10.9174311926605505No Hit
GGTGGCCTTGGCCTGTTCCCCTCGGTCTTCCCGTGCTGGTTGTTCTCGTGT10.9174311926605505No Hit
TCTTTTTCCCGGCGGCCCCTCCTCCTTTGCTCCTCTCGTTTCTGCGCTGCC10.9174311926605505No Hit
CCTGCCTTTCTCCTTCCTGTCCTTTCCACCGCTCTCGCTCCCCTGGCGCCG10.9174311926605505No Hit
TCCCTTCTCCGGCTTGCCCTTCGCCGCCTCCGTCCTCTGCTGTTGGCGTCC10.9174311926605505No Hit
GTCTTTTGCCCCCTCTCTTCCTCCCCTGTCCCCTTGTCCCTCCCTCTGCCT10.9174311926605505No Hit
CCCTGTCCCCCCGCTCCTGCCCTTTGTTGCCGCCGCCCCCGCTTTCCCGGG10.9174311926605505No Hit
TCCCTGGCCGTTTCTCGGGCCTGCTGCTGGCCCGTTCCCGCGCGGCCGCGT10.9174311926605505No Hit
GGTTCTTCCGTCTGGCCCTGGCTCGTGCTGCCCTGCCTGCTTCTGCCTTCC10.9174311926605505No Hit
CTCTCTCTCTGTGCTCTCTCCCTCTCTCCCGTCCTCCTCCCCCTTTCGCTC10.9174311926605505No Hit
CCTGGCTTTCCCTTTCGGGTCTCTGCCGCGTCTTTCCGTCCCCGCCCCCGG10.9174311926605505No Hit
CGTCCCGCCCCTCTCCCGGTCGTGGTCTTTCTCTGGCGCCGCCGCTCCTCC10.9174311926605505No Hit
CCCTGCGCCGCCCGGCCTCGTGCGTGTTTCTGCTTCCCTGCGTCCTTCTCT10.9174311926605505No Hit
CCTCCTTGGTCCCCTCTTCCTCCTCCCCGGCCCCGTGCTTGGCGGCCCGTC10.9174311926605505No Hit
GTCCCGTCTCCTCCTCCCGTGCTGCTTGCTGGCTTTCGCCACCCTCCCGGG10.9174311926605505No Hit
CGGTCCCTCTTCTCTGTTTTCTTCCTCTTCTGTCTCTTCCTCTTTCCTCTG10.9174311926605505No Hit
CGCCTTCTGTCTCTCTCGTCTCTTTCTCGGTCTCGCTCGTTTTCCTCCCTC10.9174311926605505No Hit
CCCGCTTCTCGCTCCCCTTTCCCCCCCCCTTAGTCCCGTCCNGTCGGCCCT10.9174311926605505No Hit
CCGCCTCTCTTTGCTCTCTCTCTCTGTGCTCACTCCCTCTCTCCGCTCCCC10.9174311926605505No Hit
CCCTCCCCTCTCTGTCTTCCCCCCCCTCCTTTTCCTCTGCCGGCCCCCCTC10.9174311926605505No Hit
TTCCTCGTTGCCTCGCCCCGCTTCCGGTCGTCCCTTGCTTTCCTCCCCCCC10.9174311926605505No Hit
TGTTCCCGCCCTCGTCCTTGCCCTTCGTCCGCGCGGCCCCGTTCCTTCGGC10.9174311926605505No Hit
CCTTTTTTTCTTTCCTTTTTTTTTCTTCTCCTCCTCCCCTTTTCCTTCGTT10.9174311926605505No Hit
GTCGTTTCCCTTCTCCCTCTCCTGCCCTGCCCCCCGTCCCCGGTCCCCCCG10.9174311926605505No Hit
CTCTCCTCTCCTCTCCTTCTGTCCTTCTTTCTCTTCTGCTCTTCCTACGCG10.9174311926605505No Hit
TTTGCCCGGTTTCCTTGCCTTTTCTTTGCCGTTCCGTCTCGTTTGCTTTTT10.9174311926605505No Hit
TCTCTTCTCTTCGCGCTTCTTCTCCCCCTGTCTCCGCCTCTCCCCCTCCAC10.9174311926605505No Hit
CCTCTGCCTGCTCCCCTCCCTTTGTCTTCTGCACCCTCTCTNACTCCCCTG10.9174311926605505No Hit
GCTCGGCCGCGCCCCTGTCTGCCCTCCCGTCCCGCGCCTCGCTCGTGTGTC10.9174311926605505No Hit
TGCCTTGTCCTCTGGTTGGGTCCCCTCTGCCGCCTCGCTCCTTGCGCCTCG10.9174311926605505No Hit
GCCCTTTCGTGGCTCTGCTCCGCGTCTCCCCCCGCCGCCCTTCCTGGCCGC10.9174311926605505No Hit
GTCCTTCTCTCGCCCCGGCTGCCCTCGCCCTCCCTGTCGCGCCCTTTCGCC10.9174311926605505No Hit
CGCCCGCCTCCGCTGCCGTCCCTGCCCCCGCCCTCCCCTCTCTGCCTTCCC10.9174311926605505No Hit
GCTTTTGCTCTCCCCTCTTTCGCCTCCCTCGTTCTTCCGGCCGCTTCTGCC10.9174311926605505No Hit
TTCTTTCCTCTTTGCCTTCCCCTCTTCCCCCTCTGCCCTTGCCTGGCCGCC10.9174311926605505No Hit
TGCCGCCTTCCTCTCCCGGTTCCGGCCTCTTCCCCGGCTTCTCTTTCGCTG10.9174311926605505No Hit
CCTGCGCTCTCCTCCTCTCCTCCGCCCTTCGCTGCGTTTCGCTCTTGTCCC10.9174311926605505No Hit
CGCTCCGCCGGGCCCTTTGTCCTCTTTTTCTCCTTCGTCCCTTCCCGCCGC10.9174311926605505No Hit
GGCTGCCCGTCTGCCCTGGCGTCTCCCTCTGTCCTTGGTCCCGCTCTTCTT10.9174311926605505No Hit
GCCCTGTTCCCCCTCTTCCCTCCCGCTCCTGCCGGGCCGCGCCTGGCCGGC10.9174311926605505No Hit
TTCCCTCGGCTCCCTCCGGGTTTGGTCCTGGACACGACCCGTGGGGCTCCC10.9174311926605505No Hit
CGCCCCCCCGTCCCATCAAATTCTGACTCCAAAGTCCAGTACATTTCGGTA10.9174311926605505No Hit
TCGCTTCTCTCCCCCCTGCCCTTCCCTTCGGCTCTTCGACGCGCCCTCTCG10.9174311926605505No Hit
CCCCCCGCGCCCCGGCGCCCGCCCCGGTGCTGGCCTCTTCCCGCCCTCCGC10.9174311926605505No Hit
CCCCCTCTCTTCCTCCCCTGTCCCCTTGCCCCTCCCTCTGCCTGCCCCCTC10.9174311926605505No Hit
TCCCTGCGTCCTGCTCTGCGTCTCTGTCTCTCGGCTGCCCGGTCGTCTCGT10.9174311926605505No Hit
CTCTGCTCTCGGCTCGTGCCTCCGCCGCCCTCGCTCCGTGCCCTGCCCCTC10.9174311926605505No Hit
TGTCCCCTTGCCCCTCCCTCTGCCTGCCCCCTCCCGCCCCCCTTACCTGTT10.9174311926605505No Hit
TCTTTTCCCCTCTCCCTCTCCCGCCCCTTTCTCTCCCCTCTTCTCGTTCTT10.9174311926605505No Hit
CCGGCCTCCGCCGCCCCTCCCCGCAGCTGTCGCCCCCGCCGCCGCGGCCCG10.9174311926605505No Hit
GCCCTCCCCGCGCTCTCGCCTGGCTTCTGCCTTCGCGCCGTTCCTCCCTCC10.9174311926605505No Hit
TGCTCCCCTCCGTCTGCTCGCGCTGGTTGTTCTCCTTCCTTCTCCCCTTCT10.9174311926605505No Hit
CGTGCCCGTCGCTTGCGCCCCCCTGCCCCCCCTCCTGCCTCCCTCGCCCTG10.9174311926605505No Hit
CGTCCTGCTCCCTCTGCCGCTGCTTCTGTCCTACCCCACGCNCTGCCTCTT10.9174311926605505No Hit
CTCTTCTCGGGTCGCTTTCTTTTCTGTCCTCCTCTGCGTCCGTGTCCCCCG10.9174311926605505No Hit
CCGGCTCTGGGCTCGTCCGCTTGGGCTGGTCGGTCCTCGCCCTCCGCCTCC10.9174311926605505No Hit
GTCGCCTTCTCCGCTGCCCCCCTGTTCCGCCCCCTCCCCGCTCCCTTTGGT10.9174311926605505No Hit
CCGCTCTCTCGGCTCCTTGCCCCCTCTCCTCCTCCCCCCCTTTTCCCCCCC10.9174311926605505No Hit
TTGCCGCCTTGCACTGTCCGTCTCTACTCTCCACCCTCTTGACTTCCCCCG10.9174311926605505No Hit
CCCCCCTCCTCTCTCTGTCTTCCCCCCCCTCCTTTTCCTCTCCCTGCCCCC10.9174311926605505No Hit
TTCCGCCTCTTCCTCGCTCGCTCCCCCCGTCTGGCCTCGTTTCGCCGCCTT10.9174311926605505No Hit
CCGCCCCCCCCCGCCTCCCCCCCCGCCCTTGACTTTCCCCTCCTTCCTCTC10.9174311926605505No Hit
TTGCTGCCCCCGGCCTTTCCTCCTTTGTCCGCCCCCGCTCCTGCCGCTCCT10.9174311926605505No Hit
TGCCGCGCCTGCCTGGCTTCCCGCGCTTCCCCCTGTCCCTCTCTCCTCTCT10.9174311926605505No Hit
GTTGCCTGTCTCTCTCTCTCCCTGCGCCGCCCGGCCTCGTGCGTGTTTCTG10.9174311926605505No Hit
TTTCGCGCGCTCCTTTTTCCCCTCGTGGCGGCCTTGGCTATCCGGCTGCCC10.9174311926605505No Hit
CGGCCGCCCCTCCCGCTGGCCCTGCTGCGGCTCCTCGCTGCCCTCCCGTCC10.9174311926605505No Hit
CCCTGCCTCTCCCCCTCTCCCCCGGCCTGCGGCCTCCTCGTCCTCTTCGTC10.9174311926605505No Hit
CCTGCCTTCTCGCCCCTTGTTCCTTCCTGCGCCCCGCGCTCTTCGGGGTCC10.9174311926605505No Hit
TTCTCTGTCTCTCCTCTCCGCTCCCTCTCGCTGCCCGTACTCACTTTGTCG10.9174311926605505No Hit
CCGCTCGCCCTCTCCTCCTTCCTTGGCCTGCGCCCTTGCTCTTGCTCTGCC10.9174311926605505No Hit
CTTTTCCCGCTTGCGCTCTCCCTCTTGTCGCCTCTCCCTGCTGCTCTGTTT10.9174311926605505No Hit
TTCCTTTCCTTGCTCCCCTGTCCCCCTCTCCCCCCCCTGCGTCGTCGCCCG10.9174311926605505No Hit
CTCCCGCTCTCCCTCCCTCTCCTGCCTTCTCCCTCCCCCCCCCTCCTCCTC10.9174311926605505No Hit
GTCCGCCTGTTCCTGCTCTCTGTCTCCTCCCCGGCTCGGCTGTCTTTGCCC10.9174311926605505No Hit
TGTTCCGCTCCCCCGCCCTCTTGCCCCCGTCCCCTCGTCCCTCTTGCTGGC10.9174311926605505No Hit
CTTCCCCCCTTCTCGCGCTCTCCCTCTCCCCCTCTGCTTGTTGGCCCGCCC10.9174311926605505No Hit
CGCGGTCGGACGCCCCCGCCCCTGCCCGTTGGTCGGTCGGTGGCCTGCCGC10.9174311926605505No Hit
CCCGGTCTGCCGGCCCTGTCCTAGCCCCTCTCGTCCCCGCTGGCGTCTGTC10.9174311926605505No Hit
TTGCCCTGCCGCTCCCCTTTCCCCTTCGGGCTCTTGGCGGGCCCTGGCCCT10.9174311926605505No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers