C8CR7ACXX_l01n01_sv118.35100000057741.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C8CR7ACXX_l01n01_sv118.35100000057741.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	38724424
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCC	858077	2.215854779402271	TruSeq Adapter, Index 2 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CACCGAT	95110	43.056816	31
CGATGTA	95620	43.001514	34
ACCGATG	95195	42.982918	32
CGTCTGA	97185	42.968586	16
CTCGTAT	95805	42.922325	42
ACACGTC	97660	42.91176	13
TATCTCG	96145	42.86527	39
TCTCGTA	96080	42.86366	41
CCGATGT	95585	42.83579	33
GATCGGA	99445	42.808098	1
ATCGGAA	99390	42.795647	2
ACGTCTG	97960	42.741188	15
TCGTATG	96310	42.722958	43
GTCACCG	96130	42.62804	29
CGTATGC	96540	42.565624	44
TCACCGA	96300	42.489708	30
ATCTCGT	97175	42.408607	40
TCGGAAG	100140	42.407337	3
CACGTCT	99585	42.1296	14
CGGAAGA	100740	42.082253	4