C8C2NACXX_l08n01_r5.3510000004e680.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C8C2NACXX_l08n01_r5.3510000004e680.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5692270
Sequences flagged as poor quality	0
Sequence length	51
%GC	61

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACAGTCAACAATCTCGTATG	183969	3.2319092383179293	TruSeq Adapter, Index 13 (97% over 40bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCACAGT	20175	43.34369	30
AGTCACA	20385	43.28344	28
GTCACAG	20460	43.036808	29
ACAGTCA	20320	42.92406	32
CACAGTC	20395	42.754803	31
AGTCAAC	20285	42.698673	34
TCGTATG	20465	42.645664	45
CAGTCAC	20810	42.540005	27
CAGTCAA	20510	42.383823	33
GTCTGAA	21215	42.374767	17
ACTCCAG	20990	42.357407	23
ACAATCT	20420	42.354004	39
AACTCCA	21045	42.353607	22
TCTGAAC	21200	42.330463	18
CTCCAGT	20975	42.29117	24
CTCGTAT	20600	42.289734	44
CACGTCT	21305	42.248554	14
CGTCTGA	21265	42.243393	16
CCAGTCA	21015	42.14644	26
CACACGT	21410	42.116024	12