C8C2NACXX_l08n01_matt_44.3510000004e326.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C8C2NACXX_l08n01_matt_44.3510000004e326.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12977102
Sequences flagged as poor quality	0
Sequence length	51
%GC	61

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCTCGTATGCC	579024	4.4618898734093335	TruSeq Adapter, Index 6 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATATCTC	64425	43.53296	38
AATATCT	64655	43.252655	37
CTCGTAT	65020	43.224392	42
TATCTCG	65230	43.12713	39
TCGTATG	65705	43.010044	43
TCTCGTA	65410	42.976826	41
TCTGAAC	66300	42.93809	18
CCAATAT	64970	42.914467	35
AGTCACG	66130	42.851162	28
GTCTGAA	66940	42.7393	17
GTATGCC	66175	42.667168	45
CAGTCAC	66600	42.52511	27
CGTCTGA	67220	42.507725	16
CCAGTCA	66535	42.4314	26
CTCCAGT	66620	42.32661	24
CGTATGC	66735	42.31925	44
ACGTCTG	67665	42.264744	15
ATCTCGT	66560	42.23783	40
CAATATC	66075	42.105186	36
CACGTCT	68020	42.040855	14