C8C2NACXX_l08n01_matt_41.3510000004e1af.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C8C2NACXX_l08n01_matt_41.3510000004e1af.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13825838
Sequences flagged as poor quality	0
Sequence length	51
%GC	61

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTTAGGCATCTCGTATGCC	304739	2.204126795062983	TruSeq Adapter, Index 3 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CACTTAG	32360	44.320934	31
ACTTAGG	32270	44.31208	32
TCACTTA	32605	44.02914	30
TTAGGCA	32265	44.01215	34
CTTAGGC	32435	43.857613	33
CTCGTAT	33025	43.315014	42
TAGGCAT	33015	43.0464	35
TCGTATG	33430	43.005627	43
AGTCACT	33610	42.90655	28
TCTCGTA	33405	42.862698	41
GTCACTT	33870	42.51076	29
CAGTCAC	34725	41.65842	27
CGTATGC	34740	41.409847	44
TCTGAAC	35185	41.38219	18
GTATGCC	34870	41.281277	45
CCAGTCA	35125	41.26729	26
ATCTCGT	34975	40.93877	40
GTCTGAA	35685	40.884323	17
GCATCTC	34800	40.679146	38
CTCCAGT	35720	40.636417	24