FastQCFastQC Report
Tue 22 Mar 2016
C8C2NACXX_l07n01_sea196.3510000004e5b7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC8C2NACXX_l07n01_sea196.3510000004e5b7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11927191
Sequences flagged as poor quality0
Sequence length51
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCACACG16450.06.290755711
ACACGTC17650.05.73559813
ACGTCTG18150.05.70153915
CACGTCT20250.05.443546314
CGTCTGA21000.05.14200916
CACACGT20500.05.04794812
Produced by FastQC (version 0.11.2)