C8C2NACXX_l07n01_sea195.3510000004e531.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C8C2NACXX_l07n01_sea195.3510000004e531.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11959117
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCTTGTAATCTCGTATGCC	729954	6.1037449504006025	TruSeq Adapter, Index 12 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACACGTC	79700	43.7352	13
CACACGT	79880	43.707054	12
CACGTCT	79785	43.643486	14
GCACACG	80310	43.543068	11
GTATGCC	78785	43.5363	45
ACGTCTG	80205	43.381287	15
CGTCTGA	80255	43.3038	16
CTCGTAT	78815	43.2885	42
CCTTGTA	79385	43.223167	33
AGCACAC	80990	43.219685	10
AGTCACC	79555	43.209747	28
CGTATGC	79415	43.182426	44
TCGTATG	79500	43.15607	43
GATCGGA	81660	43.12336	1
GTCACCT	79780	43.096344	29
TCGGAAG	81620	43.0725	3
CAGTCAC	80035	43.037743	27
ACCTTGT	79880	42.99122	32
GAACTCC	80545	42.946785	21
GTAATCT	79335	42.911392	37