FastQCFastQC Report
Fri 25 Mar 2016
C8C2NACXX_l06n01_sea185.3510000004e50a.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC8C2NACXX_l06n01_sea185.3510000004e50a.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8115852
Sequences flagged as poor quality0
Sequence length51
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGTAT15600.015.86400844
TCGTATG16500.014.86234645
ACGTCTG16950.014.59870415
CGTCTGA18850.013.36589216
ACACGTC18800.012.92313713
GCACACG20450.012.210525511
CACGTCT20300.012.07874414
CAGTCAC21450.011.95567827
ACTCCAG21500.011.61391223
CCAGTCA21900.011.50457426
CACACGT21350.011.48506112
GAACTCC23000.011.44324921
ACATGTC23300.011.20212632
TCCAGTC23700.010.63080925
ATGTCAG24600.010.51932434
AGTCACA24800.010.34069728
TCTCGTA25350.010.20621543
CATGTCA25800.010.03005333
CACATGT26500.09.84765531
TCACATG26750.09.67104430
Produced by FastQC (version 0.11.2)