C8C2NACXX_l06n01_sea179.3510000004e30c.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C8C2NACXX_l06n01_sea179.3510000004e30c.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7136837
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGTGGATCTCGTATGCC	344184	4.822640617965634	TruSeq Adapter, Index 7 (97% over 36bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CACACGT	37020	43.362427	12
ACACGTC	37040	43.34509	13
CACGTCT	37065	43.253643	14
GATCGGA	37525	43.19721	1
TCGGAAG	37520	43.155552	3
GCACACG	37370	43.03456	11
ACGAGTG	36850	42.955536	32
ACGTCTG	37445	42.79067	15
AGTCACG	37030	42.790623	28
CTCGTAT	36835	42.77426	42
CACGAGT	37030	42.751694	31
CGAGTGG	36935	42.738132	33
CGTCTGA	37500	42.67392	16
AGCACAC	37745	42.655582	10
AGAGCAC	37840	42.64421	8
TCGTATG	37040	42.561825	43
CGTATGC	37110	42.4876	44
GTCACGA	37345	42.46583	29
GAGTGGA	37120	42.428143	34
CAGTCAC	37315	42.415577	27