FastQCFastQC Report
Tue 22 Mar 2016
C8C2NACXX_l05n01_sea170.3510000004e45c.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC8C2NACXX_l05n01_sea170.3510000004e45c.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24747072
Sequences flagged as poor quality0
Sequence length51
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCACACG38700.07.09189911
ACGTCTG39750.07.01775515
ACACGTC38750.06.792472413
CACACGT43800.06.214768412
CGTCTGA49150.06.04176916
CACGTCT44700.05.938656314
CGTATCT33350.05.533146439
TCGTATG37700.05.490722745
CCGTATC36450.05.18598838
CCAGTCA51000.05.072746326
CTCGTAT39250.05.04459244
Produced by FastQC (version 0.11.2)