C8C2NACXX_l04n01_ah8428a-030316.3510000004e234.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C8C2NACXX_l04n01_ah8428a-030316.3510000004e234.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15837101
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACAGTGATCTCGTATGCC	643022	4.060225416255159	TruSeq Adapter, Index 5 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	71895	43.93516	1
GCACACG	71010	43.88987	11
CACACGT	71675	43.501495	12
ACACGTC	71760	43.46168	13
ACGTCTG	71420	43.40304	15
CACGTCT	71930	43.289204	14
AGCACAC	72295	43.15779	10
GAGCACA	72475	43.140762	9
CGTCTGA	71895	43.084995	16
AGAGCAC	72750	43.02407	8
TCGGAAG	73430	42.967823	3
GTCACAC	71745	42.818985	29
GATCTCG	71555	42.791935	39
GTATGCC	71745	42.74775	45
ATCGGAA	73945	42.72931	2
GAACTCC	72035	42.68273	21
CACACAG	71920	42.65467	31
CAGTCAC	72340	42.491673	27
TCCAGTC	72410	42.443043	25
GTCTGAA	73035	42.338562	17