FastQCFastQC Report
Thu 19 May 2016
C838DACXX_l03n02_heat_1h_rep1_shoot.35200000055c40.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC838DACXX_l03n02_heat_1h_rep1_shoot.35200000055c40.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18358612
Sequences flagged as poor quality0
Sequence length101
%GC24

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGTCCC2100.0073346313.5610086
GAAGAGC3850.00253653886.786605494-95
Produced by FastQC (version 0.11.2)