C7W8DACXX l07n01 t0_3.34100000034e54.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7W8DACXX l07n01 t0_3.34100000034e54.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15505734
Sequences flagged as poor quality	0
Sequence length	51
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTTAGGCATCTCGTATGCC	564484	3.64048551329463	TruSeq Adapter, Index 3 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CACTTAG	63275	43.528576	31
ACTTAGG	63310	43.51761	32
CTTAGGC	63405	43.473698	33
TCGTATG	63875	43.463074	43
CTCGTAT	63890	43.429375	42
ACGTCTG	64470	43.422394	15
CACGTCT	64715	43.26148	14
GTATGCC	64240	43.208122	45
TTAGGCA	63500	43.13228	34
CGTCTGA	64955	43.118954	16
CACACGT	64990	43.028706	12
TCACTTA	64010	43.002716	30
ATCGGAA	65305	42.903835	2
AGTCACT	64545	42.89756	28
GTCACTT	64840	42.87937	29
CGTATGC	64760	42.872585	44
ACACGTC	65240	42.86727	13
TAGGCAT	63915	42.86354	35
TCTCGTA	64880	42.780693	41
TCGGAAG	65920	42.489914	3