C7W8DACXX l05n01 4nm-3.341000000350bb.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7W8DACXX l05n01 4nm-3.341000000350bb.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	17972357
Sequences flagged as poor quality	0
Sequence length	51
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCTCGTATGCC	675840	3.7604416604900512	TruSeq Adapter, Index 6 (100% over 51bp)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	435334	2.422242113263163	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	290751	1.6177677752561892	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGTCACG	77925	43.6746	28
ACGTCTG	80175	43.62574	15
TATCTCG	78325	43.565517	39
CTCGTAT	78340	43.52785	42
ATCGGAA	79965	43.526485	2
TCGTATG	78460	43.506226	43
CACGTCT	80625	43.398987	14
GCCAATA	75675	43.358868	34
CCAATAT	75905	43.24759	35
ACACGTC	80910	43.221092	13
TCGGAAG	80675	43.154575	3
CGCCAAT	76655	43.142094	33
ATATCTC	77610	43.12911	38
CGTCTGA	81185	43.077457	16
CAATATC	76170	43.061325	36
GTCTGAA	81030	43.018265	17
AATATCT	76475	43.007263	37
GTATGCC	79690	42.849384	45
GTCACGC	79830	42.84662	29
CAGTCAC	79710	42.80655	27