C7W8DACXX l05n01 2nm-2.34100000034ff3.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7W8DACXX l05n01 2nm-2.34100000034ff3.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15440347
Sequences flagged as poor quality	0
Sequence length	51
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCC	411068	2.662297680227005	TruSeq Adapter, Index 2 (100% over 51bp)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	315339	2.0423051373133	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	181033	1.172467173179463	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGTATG	46660	43.001324	43
ACGTCTG	47815	42.934532	15
ATCGGAA	47940	42.85074	2
CTCGTAT	46780	42.797974	42
TATCTCG	46815	42.670692	39
CACGTCT	48185	42.604847	14
ACACGTC	48125	42.55512	13
CGTCTGA	48260	42.431416	16
TCGGAAG	48460	42.367718	3
GTATCTC	47280	42.24627	38
GTCTGAA	48340	42.17038	17
TGTATCT	47620	41.96353	37
GATGTAT	47225	41.928635	35
GTATGCC	47950	41.86369	45
ATGTATC	47130	41.860394	36
CACCGAT	47620	41.743378	31
CGTATGC	48075	41.72216	44
TCTCGTA	48110	41.657722	41
ACCGATG	47820	41.61181	32
CAGTCAC	48215	41.565475	27