C7KY3ACXX_l06n01_glk1_chx_pn_pd_01.35100000040761.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7KY3ACXX_l06n01_glk1_chx_pn_pd_01.35100000040761.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	29580427
Sequences flagged as poor quality	0
Sequence length	51
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCC	1051782	3.5556687535308398	TruSeq Adapter, Index 2 (100% over 51bp)
ACTTCCAGGGATTTATAAGCCGATGACGTCATAACATCCCTGACCCTTTAA	340901	1.1524546281904584	No Hit
TATTCGTTGGAATTCCTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATC	259219	0.8763193310225036	No Hit
TCTTCAGTTTAAAGATTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATC	54491	0.18421302708037313	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CACACGT	115825	43.65253	12
CGTCTGA	116295	43.56524	16
ACGTCTG	116470	43.530685	15
ACACGTC	116365	43.450737	13
GTATGCC	116160	43.22444	45
GCACACG	117045	43.220375	11
TCTGAAC	117595	42.98798	18
TCGGAAG	119785	42.970768	3
AGCACAC	118310	42.89898	10
CGTATGC	117165	42.870956	44
ACCGATG	118020	42.627506	32
GAGCACA	119220	42.609276	9
CCGATGT	117740	42.603012	33
CTCGTAT	118295	42.478554	42
TATCTCG	118040	42.476864	39
TAAGCCG	36895	42.444126	16
CTGAACT	119035	42.392204	19
TCGTATG	118810	42.328506	43
TCTCGTA	119080	42.198456	41
GTCTGAA	120395	42.10033	17