C7KY3ACXX_l05n01_nlp7_chip_pchx_10.351000000408e7.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7KY3ACXX_l05n01_nlp7_chip_pchx_10.351000000408e7.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13446668
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGATCAGATCTCGTATGCC	133134	0.9900891432732629	TruSeq Adapter, Index 9 (100% over 51bp)
ACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTG	22258	0.1655279954855731	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACGTCTG	14785	42.481884	15
GCACACG	14790	42.411728	11
CGTATGC	14750	42.170895	44
CACACGT	14895	42.127697	12
ACACGTC	14935	42.027435	13
GTATGCC	14880	41.787346	45
CGTCTGA	15040	41.77657	16
TCGGAAG	15325	41.126877	3
CGATCAG	15105	41.016113	33
GAGCACA	15395	40.87654	9
TCTCGTA	15205	40.864574	41
AGCACAC	15410	40.851357	10
TCACGAT	15230	40.66762	30
CACGATC	15230	40.593735	31
CTGAACT	15510	40.423588	19
ATCTCGT	15415	40.293278	40
AGATCTC	16095	38.632847	38
AGTCACG	16030	38.62401	28
GTCACGA	16195	38.2166	29
AGAGCAC	16960	37.197483	8