C7KY3ACXX_l04n01_nlp7_chip_mchx_input_10.35100000040cc9.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7KY3ACXX_l04n01_nlp7_chip_mchx_input_10.35100000040cc9.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11561328
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGATCAGATCTCGTATGCC	224732	1.9438251384270042	TruSeq Adapter, Index 9 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	23610	43.79634	11
CACACGT	23725	43.593536	12
ACGTCTG	23715	43.542492	15
GTATGCC	23560	43.3899	45
ACACGTC	23835	43.35159	13
CGTCTGA	23860	43.26845	16
TCGGAAG	24005	43.178177	3
GAGCACA	24020	43.133076	9
CGATCAG	23685	43.09423	33
CACGATC	23730	43.065517	31
TCACGAT	23830	42.998684	30
CGTATGC	23820	42.982216	44
AGCACAC	24140	42.9373	10
TCTCGTA	23940	42.747974	41
ATCTCGT	24010	42.632713	40
CTGAACT	24230	42.53474	19
AGATCTC	24375	41.883564	38
AGTCACG	25355	40.501247	28
AGAGCAC	25665	40.385994	8
GTCACGA	25415	40.379066	29