C7KGBACXX_l08n01_ah7660a-111215.3510000003d337.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7KGBACXX_l08n01_ah7660a-111215.3510000003d337.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13394632
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCTCGTATGCC	349994	2.6129422592572906	TruSeq Adapter, Index 6 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	41060	43.268677	11
GATCGGA	41710	43.21503	1
GTCACGC	40675	42.96674	29
ACACGTC	41410	42.878044	13
CACACGT	41430	42.849678	12
CACGTCT	41555	42.69706	14
TCACGCC	40725	42.676403	30
AGCACAC	41710	42.59978	10
ACGTCTG	41670	42.58542	15
AGTCACG	41115	42.567436	28
CGTCTGA	41920	42.283142	16
CACGCCA	40855	42.276245	31
GAGCACA	42025	42.27512	9
TCGGAAG	42460	42.13043	3
AGAGCAC	42170	42.108414	8
GTATGCC	41680	42.072388	45
TATCTCG	41755	41.921535	39
GAACTCC	41670	41.83349	21
CAGTCAC	41890	41.720818	27
ATCGGAA	43315	41.57239	2