C7KGBACXX_l04n01_13_tga1_wt.3510000003d08a.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7KGBACXX_l04n01_13_tga1_wt.3510000003d08a.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	20239548
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTTAGGCATCTCGTATGCC	97781	0.48311849651978395	TruSeq Adapter, Index 3 (100% over 51bp)
GGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACG	90304	0.4461759719139973	No Hit
GTCGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGG	65711	0.32466634136295924	No Hit
CGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGAC	47132	0.23287081312290178	No Hit
GCTGACTCTAGCAGATCTATCGATTCTAGCATGACTGGTGGACAGCAAATG	47129	0.23285599065749887	No Hit
CGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACGTCATCAAGGA	43639	0.2156125225721444	No Hit
CTTGGCGGTCTGGGTGCCCTCGTAGGGGCGGCCCTCGCCCTCGCCCTCGAT	30101	0.1487236770307321	No Hit
CCTCGATCTCGAACTCGTGGCCGTTCACGGAGCCCTCCATGCGCACCTTGA	27258	0.1346769206505995	No Hit
ATCGATTCTAGCATGACTGGTGGACAGCAAATGGGTCGGGATCTGTACGAC	26442	0.1306452100610152	No Hit
GCCAAATGTTTGAACGATCGGGAATTGGATCCGGTACCGAGCTCGAATTCT	24575	0.12142069575862069	No Hit
CGGGGATGTCGGCGGGGTGCTTCACGTAGGCCTTGGAGCCGTACTGGAACT	22551	0.11142047243347529	No Hit
CAGCAAATGGGTCGGGATCTGTACGACGATGACGATAAGGATCCGATGGCC	22384	0.1105953551927148	No Hit
CCGTGACCCAGGACTCCTCCCTGCAGGACGGCGAGTTCATCTACAAGGTGA	21431	0.10588675201639879	No Hit
TCGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGA	21024	0.10387583754340758	No Hit
CGCGTGATGAACTTCGAGGACGGCGGCGTGGTGACCGTGACCCAGGACTCC	20644	0.10199832525904236	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	11940	40.11983	11
CGTATGC	11725	39.66249	44
GTATGCC	11740	39.459282	45
ACGTCTG	12345	38.67824	15
TAGGCAT	12060	38.17248	35
AGCACAC	12580	37.95159	10
ACTTAGG	12285	37.822372	32
CACTTAG	12420	37.375027	31
CTCGTAT	12525	37.039436	42
TCGTATG	12555	37.02252	43
CACACGT	12950	37.008167	12
TTAGGCA	12610	36.614697	34
ACACGTC	13130	36.382034	13
CACGTCT	13175	36.34316	14
CGTCTGA	13355	35.88791	16
CATCTCG	13135	35.285297	39
AGGCATC	13110	35.131134	36
GAGCACA	13700	35.07777	9
TCACTTA	13315	35.048058	30
GGCATCT	13420	34.403355	37