C7KGBACXX_l03n01_empty_vector_8.3510000003d1cc.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7KGBACXX_l03n01_empty_vector_8.3510000003d1cc.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	20167255
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACTTGAATCTCGTATGCC	110061	0.5457411035859863	TruSeq Adapter, Index 8 (100% over 51bp)
GGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACG	63965	0.31717256513095116	No Hit
GTCGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGG	39150	0.19412656804309758	No Hit
CGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACGTCATCAAGGA	38710	0.19194481351081247	No Hit
CGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGAC	30398	0.15072948698273514	No Hit
GCTGACTCTAGCAGATCTATCGATTCTAGCATGACTGGTGGACAGCAAATG	29094	0.14426355991432646	No Hit
CTTGGCGGTCTGGGTGCCCTCGTAGGGGCGGCCCTCGCCCTCGCCCTCGAT	22719	0.11265291186133164	No Hit
CCTCGATCTCGAACTCGTGGCCGTTCACGGAGCCCTCCATGCGCACCTTGA	21650	0.10735224005448435	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATGCC	13310	40.06243	45
GCACACG	13610	39.9877	11
CGTATGC	13375	39.800053	44
ACGTCTG	14410	37.803898	15
AGCACAC	14475	37.737995	10
CTCGTAT	14105	37.676785	42
ACACGTC	14770	36.970856	13
CACACGT	14845	36.751938	12
CACGTCT	15250	35.735367	14
CGTCTGA	15375	35.475163	16
GAGCACA	15510	35.24853	9
AGAGCAC	15490	35.177845	8
GTCACAC	15250	35.113503	29
TCGTATG	15420	34.594727	43
CAGTCAC	15430	34.499313	27
TCTCGTA	15545	34.274567	41
CTGAACT	16275	33.458344	19
AGTCACA	16365	32.459724	28
CCAGTCA	16675	32.0993	26
TCGGAAG	17040	32.088226	3