C7KGBACXX_l03n01_empty_vector_4.3510000003d054.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7KGBACXX_l03n01_empty_vector_4.3510000003d054.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	19387485
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGACCAATCTCGTATGCC	137616	0.7098187310009524	TruSeq Adapter, Index 4 (100% over 51bp)
GGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACG	65286	0.33674300715126276	No Hit
GTCGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGG	40271	0.20771647276580743	No Hit
CGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGAC	35894	0.1851400529774749	No Hit
GCTGACTCTAGCAGATCTATCGATTCTAGCATGACTGGTGGACAGCAAATG	32575	0.16802076184714007	No Hit
CGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACGTCATCAAGGA	28214	0.1455268695243349	No Hit
CTTGGCGGTCTGGGTGCCCTCGTAGGGGCGGCCCTCGCCCTCGCCCTCGAT	20516	0.10582084267247659	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	16860	40.712433	11
GTATGCC	16420	40.55926	45
CGTATGC	16650	39.95752	44
AGCACAC	17620	39.122375	10
ACGTCTG	17715	38.86589	15
ACTGACC	17305	38.62843	32
CTCGTAT	17380	38.460842	42
CACACGT	17985	38.17829	12
ACACGTC	18065	38.061096	13
CACGTCT	18705	36.83232	14
CGTCTGA	18865	36.640053	16
GAGCACA	18875	36.6162	9
TCGTATG	18330	36.36894	43
AGAGCAC	19050	36.26802	8
TCTCGTA	18625	35.915546	41
AGTCACT	18690	35.89741	28
CAGTCAC	18895	35.614834	27
CACTGAC	18975	35.477726	31
CTGAACT	19710	34.955345	19
CTGACCA	19120	34.90407	33