C7KGBACXX_l03n01_empty_vector_12.3510000003d300.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7KGBACXX_l03n01_empty_vector_12.3510000003d300.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	19417857
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCTTGTAATCTCGTATGCC	123740	0.6372484873073274	TruSeq Adapter, Index 12 (100% over 51bp)
GGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACG	54458	0.28045319316132566	No Hit
GTCGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGG	39434	0.20308111240081744	No Hit
GCTGACTCTAGCAGATCTATCGATTCTAGCATGACTGGTGGACAGCAAATG	32381	0.16675887560609803	No Hit
CGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACGTCATCAAGGA	27184	0.1399948511311006	No Hit
CGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGAC	23670	0.12189810646973043	No Hit
CTTGGCGGTCTGGGTGCCCTCGTAGGGGCGGCCCTCGCCCTCGCCCTCGAT	23349	0.12024498892951986	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	15335	41.196396	11
GTATGCC	15345	40.674305	45
CGTATGC	15495	40.395683	44
ACGTCTG	16095	39.213024	15
AGCACAC	16135	39.16776	10
CTCGTAT	16055	39.098988	42
ACACGTC	16455	38.407745	13
CACACGT	16515	38.293777	12
CGTCTGA	17085	36.993576	16
CACGTCT	17315	36.501617	14
GAGCACA	17360	36.36493	9
AGAGCAC	17445	36.26512	8
TCTCGTA	17325	36.260983	41
CAGTCAC	17315	35.863407	27
AGTCACC	17435	35.733078	28
TCGTATG	17690	35.52324	43
CTGAACT	17910	35.302444	19
TCGGAAG	18555	34.126244	3
CCAGTCA	18900	33.106144	26
TGTAATC	18900	32.955544	36