C7KGBACXX_l03n01_empty_vector_11.3510000003d295.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7KGBACXX_l03n01_empty_vector_11.3510000003d295.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	18434584
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGGCTACATCTCGTATGCC	111933	0.6071902680310008	TruSeq Adapter, Index 11 (100% over 51bp)
GGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACG	43324	0.23501479610280332	No Hit
GTCGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGG	33011	0.17907103301056318	No Hit
GCTGACTCTAGCAGATCTATCGATTCTAGCATGACTGGTGGACAGCAAATG	27331	0.1482593803038897	No Hit
CGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACGTCATCAAGGA	20537	0.1114047379642524	No Hit
CTTGGCGGTCTGGGTGCCCTCGTAGGGGCGGCCCTCGCCCTCGCCCTCGAT	19589	0.10626222973081464	No Hit
CGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGAC	18959	0.10284474008201107	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	14260	41.067966	11
GTATGCC	14320	39.671936	45
CGTATGC	14330	39.65855	44
ACGGCTA	14500	39.150017	32
AGCACAC	15025	38.916878	10
ACGTCTG	15020	38.904625	15
CGGCTAC	14650	38.82669	33
AGTCACG	14800	38.56854	28
CACACGT	15185	38.551476	12
ACACGTC	15230	38.469097	13
CACGGCT	14950	38.07704	31
CTCGTAT	14940	37.85869	42
GGCTACA	14975	37.39978	34
GCTACAT	15085	37.084625	35
CGTCTGA	15875	36.97967	16
CACGTCT	15910	36.769745	14
GAGCACA	16075	36.55622	9
AGAGCAC	16065	36.410927	8
CATCTCG	15555	35.97544	39
CTACATC	15665	35.711555	36