C7KGBACXX_l02n01_nlp7_input_180_mchx_pn.3510000003d37a.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7KGBACXX_l02n01_nlp7_input_180_mchx_pn.3510000003d37a.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	17461014
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCTTGTAATCTCGTATGCC	478121	2.738220128567562	TruSeq Adapter, Index 12 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	55050	43.79883	11
ACGTCTG	55470	43.59911	15
GTATGCC	54960	43.5684	45
ACACGTC	55560	43.42993	13
CGTATGC	55025	43.402813	44
CACACGT	55615	43.35866	12
CGTCTGA	55925	43.19209	16
AGTCACC	55415	42.926815	28
GAGCACA	56540	42.724182	9
TCGGAAG	56860	42.694744	3
AGCACAC	56570	42.562325	10
TCTCGTA	56160	42.491158	41
ATCTCGT	56340	42.17483	40
TCGTATG	56820	42.17088	43
CTGAACT	57225	42.13951	19
CTCGTAT	56750	42.132668	42
ACTCCAG	56720	42.057922	23
TGTAATC	56110	41.97171	36
AGAGCAC	58010	41.645412	8
GATCGGA	58960	41.442024	1