C7KGBACXX_l02n01_nlp7_input_10_mchx_pn.3510000003d288.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7KGBACXX_l02n01_nlp7_input_10_mchx_pn.3510000003d288.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	14385650
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGATCAGATCTCGTATGCC	508375	3.533903577523435	TruSeq Adapter, Index 9 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATGCC	57845	43.839245	45
GCACACG	58210	43.798084	11
ACGTCTG	58295	43.639557	15
CGTATGC	58100	43.581455	44
CACACGT	58570	43.45665	12
CGTCTGA	58590	43.427513	16
ACACGTC	58700	43.356575	13
CGATCAG	57805	43.298424	33
AGTCACG	58165	43.26075	28
TCACGAT	58450	43.06921	30
GTCACGA	58300	43.025646	29
CACGATC	58335	42.966606	31
TCTCGTA	58875	42.94017	41
AGCACAC	59295	42.890114	10
GAGCACA	59465	42.881	9
CTCGTAT	59180	42.83294	42
TCGGAAG	59885	42.821552	3
CTGAACT	59465	42.76869	19
TCGTATG	59555	42.679615	43
ATCTCGT	59005	42.67247	40