C7KGBACXX_l02n01_nlp7_chip_10_mchx_pn.3510000003d0cd.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7KGBACXX_l02n01_nlp7_chip_10_mchx_pn.3510000003d0cd.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	16355916
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTTAGGCATCTCGTATGCC	554214	3.388462009709514	TruSeq Adapter, Index 3 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATGCC	63200	43.85937	45
CGTATGC	63340	43.670334	44
CACTTAG	63620	43.201237	31
TAGGCAT	63030	43.185276	35
CGTCTGA	65550	43.11704	16
ACGTCTG	65570	43.05928	15
TCTCGTA	64410	42.94321	41
GCACACG	65790	42.888866	11
CTCGTAT	64570	42.836803	42
AGTCACT	64440	42.810562	28
ACACGTC	66035	42.723713	13
CATCTCG	64225	42.714848	39
TCGTATG	64975	42.648666	43
TTAGGCA	63870	42.64746	34
CTGAACT	66190	42.594246	19
CACACGT	66310	42.543137	12
ATCTCGT	64990	42.461334	40
CAGTCAC	65310	42.30569	27
GAGCACA	66660	42.288612	9
AGCACAC	66540	42.260063	10