C7KCWACXX_l03n01_tga1_rep2_chip_300.35100000038300.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7KCWACXX_l03n01_tga1_rep2_chip_300.35100000038300.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15621084
Sequences flagged as poor quality	0
Sequence length	51
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCTTGTAATCTCGTATGCC	937795	6.003392594265545	TruSeq Adapter, Index 12 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CACACGT	106460	43.664257	12
TCTGAAC	105920	43.589592	18
CGTCTGA	106345	43.571117	16
ACGTCTG	106630	43.486313	15
AGTCACC	104680	43.47837	28
TGTAATC	102925	43.478218	36
ACACGTC	106980	43.452015	13
CTTGTAA	103040	43.44605	34
GTAATCT	103210	43.380238	37
GTCTGAA	106750	43.327827	17
GTATGCC	104905	43.21091	45
CTGAACT	106995	43.08224	19
AGAGCAC	108205	43.05158	8
CAGTCAC	106070	42.995438	27
AGCACAC	108335	42.929306	10
TAATCTC	104525	42.911976	38
ACTCCAG	106085	42.890503	23
CTCCAGT	106160	42.843243	24
TCTCGTA	105720	42.822803	41
GAGCACA	108835	42.806503	9