C7KCWACXX_l03n01_tga1_rep2_chip_0.3510000003821e.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7KCWACXX_l03n01_tga1_rep2_chip_0.3510000003821e.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	17796985
Sequences flagged as poor quality	0
Sequence length	51
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCC	824705	4.633959066662134	TruSeq Adapter, Index 2 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGAAC	94670	43.31357	18
AGTCACC	93710	43.289864	28
CGTCTGA	95290	43.20503	16
CACACGT	94915	43.204872	12
GTATGCC	93870	43.17106	45
GATGTAT	93370	43.15875	35
ACACGTC	95220	43.13264	13
ACGTCTG	95695	43.064377	15
GTCTGAA	95765	42.953136	17
TCTCGTA	94460	42.89215	41
CTGAACT	95415	42.791443	19
CTCCAGT	94130	42.715725	24
ATGTATC	94330	42.695663	36
CTCGTAT	94950	42.682045	42
CAGTCAC	94820	42.666832	27
GTATCTC	94990	42.643356	38
TCGTATG	95400	42.553833	43
TATCTCG	95355	42.54384	39
ACTCCAG	94490	42.52917	23
CGTATGC	95645	42.407516	44