C7KCWACXX_l02n01_hho5_pchx_12.3510000003841c.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7KCWACXX_l02n01_hho5_pchx_12.3510000003841c.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15347319
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCTTGTAATCTCGTATGCC	347710	2.265607432803084	TruSeq Adapter, Index 12 (100% over 51bp)
GGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACG	98745	0.6434022776225606	No Hit
GTCGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGG	77146	0.5026675994680243	No Hit
CTTGGCGGTCTGGGTGCCCTCGTAGGGGCGGCCCTCGCCCTCGCCCTCGAT	37519	0.2444661507329065	No Hit
GCTGACTCTAGCAGATCTATCGATTCTAGCATGACTGGTGGACAGCAAATG	36729	0.23931867188008538	No Hit
CGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACGTCATCAAGGA	35714	0.23270513892361266	No Hit
CGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGAC	35433	0.23087420024305222	No Hit
CAGCAAATGGGTCGGGATCTGTACGACGATGACGATAAGGATCCGATGGCC	22712	0.1479867591205995	No Hit
GGACAGCAAATGGGTCGGGATCTGTACGACGATGACGATAAGGATCCGATG	21548	0.14040237255770863	No Hit
AGCAAATGGGTCGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCT	20674	0.13470756683952423	No Hit
CGGGGATGTCGGCGGGGTGCTTCACGTAGGCCTTGGAGCCGTACTGGAACT	18462	0.12029462605162504	No Hit
GTCACCTTCAGCTTGGCGGTCTGGGTGCCCTCGTAGGGGCGGCCCTCGCCC	18293	0.1191934565248823	No Hit
ATCGATTCTAGCATGACTGGTGGACAGCAAATGGGTCGGGATCTGTACGAC	18210	0.11865264545553526	No Hit
CCTCGATCTCGAACTCGTGGCCGTTCACGGAGCCCTCCATGCGCACCTTGA	17409	0.11343349284653562	No Hit
GGCGGTCTGGGTGCCCTCGTAGGGGCGGCCCTCGCCCTCGCCCTCGATCTC	16615	0.10825995080964955	No Hit
CGGGAATTGGATCCGGTACCGAGCTCGAATTCTTAGGCGCCGGTGGAGTGG	16515	0.10760837120802663	No Hit
AGCAGATCTATCGATTCTAGCATGACTGGTGGACAGCAAATGGGTCGGGAT	16033	0.10446775752820411	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	39575	43.791283	11
GTATGCC	39240	43.372566	45
CGTATGC	39430	43.19224	44
AGCACAC	40050	43.182034	10
CACACGT	40285	42.99157	12
ACGTCTG	40345	42.94144	15
ACACGTC	40340	42.921795	13
CACGTCT	40585	42.659782	14
CTCGTAT	39860	42.65925	42
TCGTATG	39980	42.632515	43
CGTCTGA	40630	42.485306	16
GAGCACA	40870	42.33766	9
AGAGCAC	40975	42.2127	8
CAGTCAC	40310	42.043846	27
AGTCACC	40425	41.92981	28
CTGAACT	41120	41.91899	19
TCTCGTA	40645	41.897335	41
TCCAGTC	41125	41.56624	25
CCAGTCA	40975	41.372482	26
TCGGAAG	41870	41.22158	3