C7KCWACXX_l02n01_hho5_pchx_11.351000000383ca.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7KCWACXX_l02n01_hho5_pchx_11.351000000383ca.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15622836
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGGCTACATCTCGTATGCC	280199	1.7935219956223059	TruSeq Adapter, Index 11 (100% over 51bp)
GGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACG	101362	0.6488066571267854	No Hit
GTCGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGG	80699	0.5165451394356313	No Hit
CTTGGCGGTCTGGGTGCCCTCGTAGGGGCGGCCCTCGCCCTCGCCCTCGAT	37056	0.23719125003936545	No Hit
GCTGACTCTAGCAGATCTATCGATTCTAGCATGACTGGTGGACAGCAAATG	36983	0.23672398532507158	No Hit
CGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGAC	36375	0.23283224633478838	No Hit
CGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACGTCATCAAGGA	34482	0.22071536819563364	No Hit
CAGCAAATGGGTCGGGATCTGTACGACGATGACGATAAGGATCCGATGGCC	23230	0.14869259332940576	No Hit
GGACAGCAAATGGGTCGGGATCTGTACGACGATGACGATAAGGATCCGATG	21947	0.14048025595352853	No Hit
AGCAAATGGGTCGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCT	21137	0.13529553789081572	No Hit
GTCACCTTCAGCTTGGCGGTCTGGGTGCCCTCGTAGGGGCGGCCCTCGCCC	19176	0.12274339946985297	No Hit
CGGGGATGTCGGCGGGGTGCTTCACGTAGGCCTTGGAGCCGTACTGGAACT	18989	0.12154643369488101	No Hit
ATCGATTCTAGCATGACTGGTGGACAGCAAATGGGTCGGGATCTGTACGAC	18298	0.11712342112533217	No Hit
CGGGAATTGGATCCGGTACCGAGCTCGAATTCTTAGGCGCCGGTGGAGTGG	16826	0.10770131620148865	No Hit
GGCGGTCTGGGTGCCCTCGTAGGGGCGGCCCTCGCCCTCGCCCTCGATCTC	16635	0.10647874688052797	No Hit
CCTCGATCTCGAACTCGTGGCCGTTCACGGAGCCCTCCATGCGCACCTTGA	16173	0.1035215373188325	No Hit
AGCAGATCTATCGATTCTAGCATGACTGGTGGACAGCAAATGGGTCGGGAT	16142	0.10332310983742005	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	33210	43.48581	11
AGCACAC	33730	42.775387	10
ACGTCTG	33660	42.733257	15
ACACGTC	33835	42.609394	13
GTATGCC	32670	42.535515	45
CACACGT	34000	42.4357	12
CGTATGC	32825	42.35536	44
CGGCTAC	33070	42.220226	33
CACGTCT	34195	42.104153	14
CACGGCT	33355	42.101665	31
ACGGCTA	33250	42.08573	32
CTCGTAT	33140	42.000965	42
AGTCACG	33490	41.9333	28
GGCTACA	32765	41.905884	34
AGAGCAC	34475	41.870598	8
GAGCACA	34515	41.854664	9
CGTCTGA	34370	41.81776	16
TCGTATG	33350	41.797215	43
GCTACAT	33140	41.397743	35
CATCTCG	33310	41.32157	39