C7D4YACXX l05n01 ah8115b-062415.3410000000d737.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7D4YACXX l05n01 ah8115b-062415.3410000000d737.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	758290
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTCCGCACATCTCGTATG	17148	2.2614039483574886	TruSeq Adapter, Index 18 (97% over 40bp)
ACTTCCAGGGATTTATAAGCCGATGACGTCATAACATCCCTGACCCTTTAA	6684	0.8814569623758719	No Hit
TATTCGTTGGAATTCCTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATC	5484	0.7232061612311913	No Hit
TCTTCAGTTTAAAGATTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATC	1331	0.17552651360297514	No Hit

Adapter graph

$Kmer graph$

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CCTCGGG	540	43.742886	15
GCACACG	2010	42.97808	11
CACACGT	2020	42.65395	12
ACACGTC	2000	42.630566	13
AGCACAC	2040	42.56661	10
CACGTCT	2010	42.530396	14
AGTCACG	1980	42.507103	28
ACGTCTG	2030	42.33301	15
ACGTCCG	1980	42.166138	32
GAACTCC	2040	42.125504	21
GAGCACA	2065	42.05127	9
ATCGGAA	2115	42.014442	2
CGTCCGC	1990	41.8384	33
TCACGTC	2010	41.760708	30
CCCAGGC	685	41.719543	34
TCGGAAG	2125	41.71086	3
GTCACGT	2020	41.665375	29
CCAGTCA	2035	41.46885	26
GATCGGA	2140	41.467716	1
GTCTGAA	2080	41.423546	17