C7D4YACXX l04n01 ah8440b-062415.3410000000e27c.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7D4YACXX l04n01 ah8440b-062415.3410000000e27c.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1930465
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCC	95207	4.931816945658171	TruSeq Adapter, Index 2 (100% over 51bp)
ACTTCCAGGGATTTATAAGCCGATGACGTCATAACATCCCTGACCCTTTAA	59913	3.1035527709645088	No Hit
TATTCGTTGGAATTCCTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATC	47891	2.4808012577280603	No Hit
TCTTCAGTTTAAAGATTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATC	11018	0.5707433183196794	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	9950	43.86417	11
TCGGAAG	10015	43.827717	3
CACACGT	9980	43.732315	12
ACACGTC	9965	43.730415	13
AGCACAC	10035	43.559883	10
GAGCACA	10040	43.539314	9
GATCGGA	10145	43.348907	1
ACGTCTG	10060	43.317455	15
ATCGGAA	10165	43.312645	2
AGAGCAC	10115	43.26097	8
CGTCTGA	10050	43.24863	16
CACGTCT	10070	43.207413	14
TATCTCG	9870	43.200706	39
CTGACCC	6645	43.079403	40
GTCTGAA	10110	42.96971	17
CGATGTA	10040	42.95781	34
CCTCGGG	5425	42.921204	15
CCGATGT	10055	42.89262	33
GAACTCC	10115	42.8873	21
TCGGGGA	6700	42.81211	17