C7D4YACXX l04n01 ah8335b-062415.3410000000e289.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7D4YACXX l04n01 ah8335b-062415.3410000000e289.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1782173
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACTTCCAGGGATTTATAAGCCGATGACGTCATAACATCCCTGACCCTTTAA	6222	0.34912435549186305	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTCCGCACATCTCGTATG	5735	0.32179816437573683	TruSeq Adapter, Index 18 (97% over 40bp)
TATTCGTTGGAATTCCTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATC	5317	0.29834365126169005	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CCTCGGG	640	38.670715	15
CTCGGGG	660	37.49888	16
TCGGGGA	870	37.240265	17
CCAGGCG	875	37.025387	35
AGTCACG	690	36.84362	28
CCCAGGC	885	36.60599	34
CAGGCGG	895	36.198	36
GGCGGTC	885	35.84437	38
ACGTCCG	725	35.68558	32
GTCTCCC	900	35.25587	42
AGGCGGT	905	35.052235	37
CGTCCGC	735	34.89398	33
GCACACG	845	34.611435	11
GCGGTCT	930	34.597683	39
CATCTCG	765	34.417492	41
CCTGACC	770	33.89699	39
ACACGTC	865	33.811172	13
CTGACCC	760	33.753727	40
GTCACGT	760	33.74615	29
CACACGT	870	33.616856	12