C7D4YACXX l04n01 ah8225a-062415.3410000000e26f.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7D4YACXX l04n01 ah8225a-062415.3410000000e26f.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6039785
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGACCAATCTCGTATGCC	221245	3.663127081510352	TruSeq Adapter, Index 4 (100% over 51bp)
ACTTCCAGGGATTTATAAGCCGATGACGTCATAACATCCCTGACCCTTTAA	7565	0.12525280287294993	No Hit
TATTCGTTGGAATTCCTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATC	7200	0.11920954139923855	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	24210	43.54562	11
ACACGTC	24340	43.34077	13
ACGTCTG	24290	43.338444	15
CACGTCT	24315	43.29245	14
CACACGT	24385	43.279243	12
GATCGGA	24600	43.173523	1
CGTCTGA	24380	43.16887	16
AGCACAC	24635	42.8857	10
TCGGAAG	24865	42.70722	3
GAGCACA	24800	42.692856	9
TCCAGTC	24430	42.688766	25
CAGTCAC	24465	42.598694	27
GAACTCC	24600	42.58654	21
GTCTGAA	24740	42.57708	17
CCAGTCA	24515	42.513218	26
GTATGCC	24040	42.500595	45
AGAGCAC	24980	42.456924	8
ACTGACC	24485	42.41336	32
CTCGTAT	24135	42.32398	42
AGTCACT	24695	42.23489	28