C7D4YACXX l03n01 bt5 -chx #12.3410000000dd4e.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7D4YACXX l03n01 bt5 -chx #12.3410000000dd4e.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7615052
Sequences flagged as poor quality	0
Sequence length	51
%GC	51

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

Sequence	Count	Percentage	Possible Source
GGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACG	40239	0.5284139885059222	No Hit
GTCGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGG	30415	0.3994063336665331	No Hit
CGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACGTCATCAAGGA	25129	0.3299911806248992	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCTTGTAATCTCGTATGCC	18778	0.2465905682587591	TruSeq Adapter, Index 12 (100% over 51bp)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17812	0.23390516571653092	No Hit
CGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGAC	16116	0.2116334858908383	No Hit
GCTGACTCTAGCAGATCTATCGATTCTAGCATGACTGGTGGACAGCAAATG	16021	0.21038595665531898	No Hit
ATCGATTCTAGCATGACTGGTGGACAGCAAATGGGTCGGGATCTGTACGAC	12229	0.1605898423280629	No Hit
CGGGAATTGGATCCGGTACCGAGCTCGAATTCTTAGGCGCCGGTGGAGTGG	11393	0.1496115850554927	No Hit
GCCGCCCCTACGAGGGCACCCAGACCGCCAAGCTGAAGGTGACCAAGGGCG	9873	0.12965111728718334	No Hit
GCCAAATGTTTGAACGATCGGGAATTGGATCCGGTACCGAGCTCGAATTCT	9651	0.12673583844207498	No Hit
GCTTAACGTAATTCAACAGAAATTATATGATAATCATCGCAAGACCGGCAA	9273	0.12177198527337699	No Hit
GCGAGATCAAGATGAGGCTGAAGCTGAAGGACGGCGGCCACTACGACGCCG	8819	0.11581010871626353	No Hit
CCGTGACCCAGGACTCCTCCCTGCAGGACGGCGAGTTCATCTACAAGGTGA	8613	0.11310494005819002	No Hit
GTGACCGTGACCCAGGACTCCTCCCTGCAGGACGGCGAGTTCATCTACAAG	8577	0.11263219213736163	No Hit
CTCGAAGTTCATCACGCGCTCCCACTTGAAGCCCTCGGGGAAGGACAGCTT	8521	0.11189680648273971	No Hit
CCGACATCAAGCTGGACATCACCTCCCACAACGAGGACTACACCATCGTGG	8461	0.11110889328135908	No Hit
TGAACTTCGAGGACGGCGGCGTGGTGACCGTGACCCAGGACTCCTCCCTGC	8225	0.10800976802259525	No Hit
CGCAGCTTCACCTTGTAGATGAACTCGCCGTCCTGCAGGGAGGAGTCCTGG	8056	0.10579047917203979	No Hit
GCTCGGTGGAGGCCTCCCAGCCCATGGTCTTCTTCTGCATTACGGGGCCGT	8027	0.10540965445803917	No Hit
CCCAGGACTCCTCCCTGCAGGACGGCGAGTTCATCTACAAGGTGAAGCTGC	7831	0.10283580466686242	No Hit

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTATGC	2320	37.8236	44
GCACACG	2785	37.726753	11
GTATGCC	2430	36.11166	45
CACACGT	2945	35.60069	12
ACGTCTG	2915	35.349846	15
ACACGTC	2940	35.201843	13
CTCGTAT	2690	34.128708	42
CGTCTGA	3130	33.21049	16
AGCACAC	3165	33.126072	10
TCGTATG	2675	32.888783	43
AGTCACC	3210	32.032566	28
CACGTCT	3260	31.746864	14
CAGTCAC	3275	31.464474	27
AGAGCAC	3430	30.56677	8
GAGCACA	3550	29.533525	9
TCGGAAG	3585	28.99397	3
TCTCGTA	3240	28.265802	41
CTGAACT	3695	28.132484	19
ATCTCGT	3340	28.093588	40
TCCAGTC	3715	27.798239	25

Summary

Basic Statistics

Per base sequence quality

Per tile sequence quality

Per sequence quality scores

Per base sequence content

Per sequence GC content

Per base N content

Sequence Length Distribution

Sequence Duplication Levels

Overrepresented sequences

Adapter Content

Kmer Content