FastQCFastQC Report
Wed 5 Aug 2015
C7D4YACXX l02n01 k_60_1.3410000000d695.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC7D4YACXX l02n01 k_60_1.3410000000d695.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13250685
Sequences flagged as poor quality0
Sequence length51
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGGGAT18500.09.4951731
GGCGAAT14000.08.5256571
CGGGGAT27850.08.4098481
GCCGTAT11650.07.7323961
GCGGTAT10600.07.6485071
GCGGATT16200.07.6458841
CCGGGAT24800.07.5371381
GTCGAAT16150.07.3906621
CTCGGAT19950.07.337541
GCCGGAT29350.07.2127321
GGCGGAT29450.07.18824051
GGGAGAT47400.07.1267741
GGCCGAT22850.06.99764971
GCGAAAT17900.06.9197391
GGAAAAT57650.06.87532761
GCGGGAA27000.06.83959151
CGCGATT6954.489084E-86.80478671
CGGGTGT13300.06.7731141
CGGGTAT11000.06.75618121
CGCGGAT17000.06.75618121
Produced by FastQC (version 0.11.2)