FastQCFastQC Report
Tue 25 Aug 2015
C7D1TACXX l08n01 571.34100000033deb.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC7D1TACXX l08n01 571.34100000033deb.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences43946131
Sequences flagged as poor quality0
Sequence length51
%GC32

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA19750.07.0673671
GCACACG19900.07.009569611
CTGACCA22650.06.555908733
ACGTCTG22250.06.26919715
CACACGT26000.05.797679412
ACTGACC24150.05.3100232
Produced by FastQC (version 0.11.2)