C7D1TACXX l04n01 tga1_chip_60.3410000003406e.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7D1TACXX l04n01 tga1_chip_60.3410000003406e.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9714871
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACAGTGATCTCGTATGCC	247186	2.5444084640959206	TruSeq Adapter, Index 5 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACGTCTG	27485	43.467197	15
GCACACG	27430	43.416252	11
GTATGCC	27150	43.34035	45
CGTCTGA	27660	43.094578	16
ACACGTC	27665	43.047455	13
CGTATGC	27350	43.015198	44
CACACGT	27715	42.977913	12
CACAGTG	27445	42.76793	33
GTCACAC	27470	42.729008	29
AGCACAC	27945	42.5354	10
GAGCACA	27990	42.47505	9
TCGGAAG	27955	42.42257	3
TCTCGTA	27700	42.414825	41
AGAGCAC	28080	42.354942	8
CTGAACT	28090	42.194386	19
CAGTGAT	27910	41.950592	35
TCTGAAC	28330	41.940174	18
ACAGTGA	27860	41.87244	34
ACACAGT	28010	41.696396	32
ATCTCGT	28235	41.682865	40