C7D1TACXX l04n01 tga1_chip_5.34100000034001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7D1TACXX l04n01 tga1_chip_5.34100000034001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10246223
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTTAGGCATCTCGTATGCC	289267	2.823157372233651	TruSeq Adapter, Index 3 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATGCC	32845	43.846558	45
CGTATGC	32895	43.725193	44
CGTCTGA	33325	43.67495	16
ACACGTC	33270	43.66941	13
ACGTCTG	33370	43.622795	15
CACACGT	33400	43.560284	12
TCTCGTA	33130	43.415043	41
GCACACG	33575	43.38015	11
TCGGAAG	33595	43.010677	3
CACTTAG	33290	42.942802	31
ATCTCGT	33495	42.935223	40
CATCTCG	33550	42.650246	39
TAGGCAT	33430	42.63509	35
AGTCACT	33615	42.51423	28
CTCGTAT	33955	42.43308	42
AGCACAC	34305	42.35782	10
TCGTATG	34085	42.34385	43
TCTGAAC	34225	42.341553	18
AGAGCAC	34395	42.253525	8
GCATCTC	33945	42.127434	38