C7D1TACXX l04n01 tga1_chip_30.34100000034052.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7D1TACXX l04n01 tga1_chip_30.34100000034052.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11804814
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGACCAATCTCGTATGCC	356724	3.0218519326098656	TruSeq Adapter, Index 4 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	42275	43.72852	11
ACGTCTG	42370	43.627705	15
GTATGCC	41630	43.451656	45
ACACGTC	42495	43.380165	13
CGTCTGA	42595	43.35499	16
CGTATGC	41800	43.296467	44
CACACGT	42760	43.16939	12
TCGGAAG	42795	42.93325	3
AGCACAC	42955	42.89448	10
GAGCACA	43025	42.85084	9
TCTCGTA	42560	42.586754	41
AGAGCAC	43310	42.579254	8
CTGAACT	43385	42.55999	19
TCTGAAC	43385	42.502945	18
AGTCACT	42750	42.360638	28
ATCTCGT	42590	42.229233	40
ACTGACC	42915	42.19777	32
CTCCAGT	43400	41.93875	24
ACTCCAG	43465	41.90709	23
AATCTCG	42395	41.887474	39