C7D1TACXX l04n01 tga1_chip_1.34100000033fdc.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7D1TACXX l04n01 tga1_chip_1.34100000033fdc.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11867658
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCC	656779	5.5341921716989155	TruSeq Adapter, Index 2 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	74655	43.924038	11
ACGTCTG	74675	43.86166	15
CGTCTGA	74830	43.719692	16
ACACGTC	74840	43.701214	13
GTATGCC	73660	43.616924	45
CACACGT	75125	43.61629	12
CGTATGC	73740	43.526894	44
AGCACAC	75210	43.525116	10
GAGCACA	75330	43.494606	9
AGTCACC	73850	43.428547	28
AGAGCAC	75585	43.40741	8
ACCGATG	73960	43.360912	32
TCGGAAG	75470	43.357166	3
CTGAACT	75310	43.3066	19
TCTCGTA	74195	43.275124	41
GTCACCG	74820	43.205315	29
TCTGAAC	75500	43.19166	18
ATCTCGT	74645	42.99917	40
CCGATGT	74835	42.98921	33
CGATGTA	74405	42.974583	34