C7D1TACXX l03n01 ah8440a-062415.3410000000d596.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7D1TACXX l03n01 ah8440a-062415.3410000000d596.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15908609
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATGTCAGAATCTCGTATG	500660	3.14710104447221	TruSeq Adapter, Index 15 (97% over 40bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	78895	50.74544	1
TCGGAAG	79220	49.79342	3
ATCGGAA	80545	49.31092	2
GCACACG	87540	43.631096	11
CACACGT	88315	43.248215	12
ACGTCTG	87735	43.23517	15
CACGTCT	88320	43.223324	14
ACACGTC	88160	43.218037	13
AGCACAC	88375	43.19322	10
GAGCACA	88450	43.13139	9
CGTCTGA	87775	43.0886	16
AGAGCAC	88820	42.876408	8
GAACTCC	87450	42.615807	21
TCCAGTC	87655	42.49552	25
CAGTCAC	86505	42.454807	27
CCAGTCA	86255	42.39176	26
ACTCCAG	87920	42.33447	23
TCGTATG	76150	42.311543	45
GTCTGAA	89225	42.265926	17
CGGAAGA	90885	42.227955	4