C7D1TACXX l02n01 ah8440b-062415.3410000000e27c.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7D1TACXX l02n01 ah8440b-062415.3410000000e27c.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12074284
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACTTCCAGGGATTTATAAGCCGATGACGTCATAACATCCCTGACCCTTTAA	325179	2.6931534822271863	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCC	266638	2.2083131388991677	TruSeq Adapter, Index 2 (100% over 51bp)
TATTCGTTGGAATTCCTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATC	259190	2.1466283218118773	No Hit
TCTTCAGTTTAAAGATTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATC	61075	0.5058270950062133	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	32215	43.56395	11
ACACGTC	32430	43.18495	13
CACACGT	32480	43.153107	12
TCGGGGA	35425	42.972355	17
ACGTCTG	32595	42.968124	15
CTCGGGG	28690	42.888847	16
CACGTCT	32675	42.876873	14
AGCACAC	32730	42.87161	10
CCAGGGA	36035	42.74215	5
CCTCGGG	28820	42.616436	15
GGCGGTC	35585	42.59754	38
TAAGCCG	36155	42.577652	16
CGTCTGA	32915	42.496582	16
TCCAGGG	36170	42.47683	4
CTGACCC	36035	42.47409	40
GATCGGA	33270	42.46587	1
CCTGACC	36035	42.415783	39
CCGATGT	31680	42.40545	33
GTCTCCC	35880	42.35028	42
GAGCACA	33195	42.332054	9