C7D1TACXX l02n01 ah8335a-062415.3410000000e296.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7D1TACXX l02n01 ah8335a-062415.3410000000e296.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15887398
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTGAAACGATCTCGTATG	483835	3.0454011412063826	TruSeq Adapter, Index 19 (97% over 40bp)
TATTCGTTGGAATTCCTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATC	25397	0.159856258400526	No Hit
ACTTCCAGGGATTTATAAGCCGATGACGTCATAACATCCCTGACCCTTTAA	18560	0.11682215048681982	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	58825	43.85536	11
GATCGGA	59600	43.67728	1
CACACGT	59305	43.504192	12
ACACGTC	59240	43.47218	13
ACGTCTG	59250	43.39882	15
CACGTCT	59380	43.32275	14
AGCACAC	59660	43.237785	10
AGTCACG	58305	43.20149	28
CGTCTGA	59525	43.182816	16
GAGCACA	60005	43.06793	9
TCGGAAG	60515	42.99151	3
GTCACGT	58500	42.845963	29
AGAGCAC	60520	42.79437	8
TCACGTG	58790	42.63844	30
CACGTGA	58705	42.608467	31
CGATCTC	58025	42.565933	40
GAACTCC	59745	42.550762	21
GATCTCG	58795	42.49837	41
CAGTCAC	59630	42.471684	27
TCCAGTC	59650	42.41919	25