C7D1TACXX l02n01 ah8225a-062415.3410000000e26f.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C7D1TACXX l02n01 ah8225a-062415.3410000000e26f.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	36937023
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGACCAATCTCGTATGCC	566017	1.5323839173503506	TruSeq Adapter, Index 4 (100% over 51bp)
TATTCGTTGGAATTCCTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATC	44818	0.12133625387189433	No Hit
ACTTCCAGGGATTTATAAGCCGATGACGTCATAACATCCCTGACCCTTTAA	42261	0.1144136602454399	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	70670	42.98647	11
ACGTCTG	71830	42.25281	15
CACACGT	72070	42.167038	12
GATCGGA	72640	42.16028	1
ACACGTC	72080	42.129974	13
CACGTCT	72290	41.990337	14
CGTCTGA	72880	41.656425	16
AGCACAC	73045	41.582634	10
GAGCACA	73600	41.33632	9
ACTGACC	70645	41.220757	32
CAGTCAC	72390	40.937626	27
GTATGCC	70450	40.884693	45
TCCAGTC	73005	40.74239	25
GAACTCC	74010	40.711975	21
AGAGCAC	74895	40.684658	8
CCAGTCA	73190	40.538734	26
TCGGAAG	75500	40.525497	3
CGTATGC	71800	40.069885	44
AGTCACT	73525	40.066994	28
GTCTGAA	75835	40.0451	17