C68Y0ACXX_l08n02_34310-1.34200000035810.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C68Y0ACXX_l08n02_34310-1.34200000035810.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5815882
Sequences flagged as poor quality	0
Sequence length	101
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTA	28332	0.48714881079086547	No Hit
GTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTAC	24613	0.42320322179851655	No Hit
TTGTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACT	14411	0.24778700805827905	No Hit
GTGTTTGAGGAGGGTGACGGGCGGTGTGTACGCGCTTCAGGGCCCTGTTC	11424	0.19642764416471997	No Hit
TGTGTTTGAGGAGGGTGACGGGCGGTGTGTACGCGCTTCAGGGCCCTGTT	10825	0.1861282605114753	No Hit
GTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGC	8778	0.1509315354059797	No Hit
GTGTTTGAGGGGGGTGACGGGCGGTGTGTACGCGCTTCAGGGCCCTGTTC	7655	0.1316223403432188	No Hit
TGTGTTTGAGGGGGGTGACGGGCGGTGTGTACGCGCTTCAGGGCCCTGTT	7487	0.12873369851726701	No Hit
TGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAG	7459	0.12825225821294173	No Hit
TTGTGTTTGAGGAGGGTGACGGGCGGTGTGTACGCGCTTCAGGGCCCTGT	7120	0.12242339167128906	No Hit
TTGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGA	6745	0.11597553045264673	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GAGCGGC	920	55.13795	9
CGGGAGA	1270	53.802975	4
TTGTGTT	71575	50.012054	1
AGAGCGG	1090	47.4116	8
CGGAAAG	585	45.423016	5
CGGACGG	160	44.507786	1
GAACCGG	365	37.719837	1
AACCGGA	345	37.14888	2
GATCCGG	500	36.08098	1
AAGCGGC	340	33.464706	9
TGTGTTT	107450	33.4507	2
TCGGGAG	2095	32.845257	3
ATTCGGA	235	32.318645	2
CACCGAG	250	32.28298	1
CGGAGAG	775	31.837976	5
CGAGTGG	225	31.64998	1
ATGCCGG	260	31.041327	1
GTACCCC	275	29.348164	1
ACCGGAA	275	29.336273	3
TCGGGAA	460	28.8861	3